Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AL671710.1-201ENST00000610245 2349 ntBASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 HMGN1P19-201ENST00000436976 333 ntBASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 SERPINA7P1-201ENST00000443077 631 ntBASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AP002490.2-201ENST00000524791 560 ntBASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
SCUBE3Q8IX30 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 AC012569.1-201ENST00000591191 1524 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 MIR4515-201ENST00000584082 81 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 AC013467.2-201ENST00000605472 835 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 AC092865.6-201ENST00000642101 219 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 AC025580.3-201ENST00000617932 1424 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 BCAR1-209ENST00000546196 1340 ntBASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCUBE3Q8IX30 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC087641.1-201ENST00000557561 1021 ntBASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC023141.13-201ENST00000604991 943 ntBASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 LINC02084-201ENST00000606069 1096 ntBASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AL513190.1-201ENST00000621254 727 ntBASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 AC007064.4-201ENST00000637740 555 ntBASIC17.68■□□□□ 0.42
SCUBE3Q8IX30 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms