Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 POM121L3P-201ENST00000419331 1163 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 NUS1P1-201ENST00000446295 882 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC012615.1-201ENST00000565797 1299 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 MIR3180-1-201ENST00000580374 94 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 MIR3180-3-201ENST00000584616 94 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC092329.2-201ENST00000598402 547 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC092119.3-201ENST00000612618 583 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AL358472.4-201ENST00000633140 710 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC097637.2-201ENST00000624096 1997 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 SPDYE21P-201ENST00000413323 827 ntBASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 AP000867.4-201ENST00000641616 219 ntBASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC50Q8IVM0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 ACTG1P4-201ENST00000425123 1122 ntBASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC50Q8IVM0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC50Q8IVM0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms