Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GPS2P2-201ENST00000430745 888 ntBASIC17.88■□□□□ 0.45
RNF135Q8IUD6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.88■□□□□ 0.45
RNF135Q8IUD6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 STK25P1-201ENST00000585406 838 ntBASIC17.88■□□□□ 0.45
RNF135Q8IUD6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ACTL9-202ENST00000612068 1252 ntBASIC17.88■□□□□ 0.45
RNF135Q8IUD6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF135Q8IUD6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 AC012313.1-201ENST00000593393 3059 ntBASIC17.87■□□□□ 0.45
RNF135Q8IUD6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF135Q8IUD6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 ATP5G2P4-201ENST00000442175 420 ntBASIC17.86■□□□□ 0.45
RNF135Q8IUD6 RN7SL589P-201ENST00000481268 310 ntBASIC17.86■□□□□ 0.45
RNF135Q8IUD6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 AC243562.1-201ENST00000560672 389 ntBASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 AL662799.1-202ENST00000614205 422 ntBASIC17.86■□□□□ 0.45
RNF135Q8IUD6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF135Q8IUD6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 COX5BP8-201ENST00000416911 349 ntBASIC17.85■□□□□ 0.45
RNF135Q8IUD6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 RN7SL692P-201ENST00000464677 288 ntBASIC17.85■□□□□ 0.45
RNF135Q8IUD6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 AC008677.1-201ENST00000519230 1561 ntBASIC17.85■□□□□ 0.45
RNF135Q8IUD6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF135Q8IUD6 SPDYE22P-201ENST00000582158 798 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms