Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 PMS2P2-201ENST00000425039 1128 ntBASIC16.15■□□□□ 0.18
RAB43Q86YS6 MKNK2P1-201ENST00000437526 628 ntBASIC16.15■□□□□ 0.18
RAB43Q86YS6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 SNHG9-202ENST00000564014 471 ntBASIC16.15■□□□□ 0.18
RAB43Q86YS6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB43Q86YS6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB43Q86YS6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB43Q86YS6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 YBX1P5-201ENST00000509441 847 ntBASIC16.14■□□□□ 0.17
RAB43Q86YS6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 AL513190.1-201ENST00000621254 727 ntBASIC16.14■□□□□ 0.17
RAB43Q86YS6 AC010507.1-201ENST00000633895 436 ntBASIC16.14■□□□□ 0.17
RAB43Q86YS6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 AC046185.3-201ENST00000623228 1824 ntBASIC16.14■□□□□ 0.17
RAB43Q86YS6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 BCAR1-209ENST00000546196 1340 ntBASIC16.14■□□□□ 0.17
RAB43Q86YS6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB43Q86YS6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB43Q86YS6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB43Q86YS6 IGLL3P-201ENST00000412472 434 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 HTR5BP-201ENST00000430851 1154 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB43Q86YS6 ALG1L5P-201ENST00000482043 771 ntBASIC16.13■□□□□ 0.17
RAB43Q86YS6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms