Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 MIR3909-201ENST00000579518 119 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 MIR4469-201ENST00000583919 79 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 AL009183.1-201ENST00000603760 355 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 AC092902.6-201ENST00000641783 218 ntBASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM4Q86VH4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AL391256.1-201ENST00000443260 1855 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 PMS2P4-201ENST00000412466 1052 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AC109635.5-201ENST00000533593 962 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 AC055717.3-201ENST00000622967 595 ntBASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM4Q86VH4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 AC004967.1-201ENST00000453589 447 ntBASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 AL691403.2-201ENST00000618460 490 ntBASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 AL161645.1-201ENST00000622716 1255 ntBASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM4Q86VH4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms