Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 PAUPAR-201ENST00000630360 2965 ntBASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LCN1P1Q5VSP4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LCN1P1Q5VSP4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 AC024909.3-201ENST00000611513 2257 ntBASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LCN1P1Q5VSP4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms