Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 NKAPP1-205ENST00000585790 367 ntBASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.18□□□□□ -0.62
SYCNQ0VAF6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AC008894.3-201ENST00000624324 3103 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AC139887.3-201ENST00000568585 713 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AC008608.2-201ENST00000606089 416 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AL353135.1-201ENST00000606729 504 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AL589182.2-201ENST00000619332 1049 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AL355877.3-201ENST00000622820 899 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.17□□□□□ -0.62
SYCNQ0VAF6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.17□□□□□ -0.62
SYCNQ0VAF6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms