Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CD99P1-205ENST00000527459 561 ntBASIC14.29□□□□□ -0.12
SSBP1Q04837 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SSBP1Q04837 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP1Q04837 MIR4651-201ENST00000582622 73 ntBASIC14.29□□□□□ -0.12
SSBP1Q04837 Z99916.2-201ENST00000604037 246 ntBASIC14.29□□□□□ -0.12
SSBP1Q04837 AL031432.5-201ENST00000641059 760 ntBASIC14.29□□□□□ -0.12
SSBP1Q04837 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SSBP1Q04837 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP1Q04837 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.29□□□□□ -0.12
SSBP1Q04837 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.29□□□□□ -0.12
SSBP1Q04837 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SSBP1Q04837 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SSBP1Q04837 AC097637.2-201ENST00000624096 1997 ntBASIC14.29□□□□□ -0.12
SSBP1Q04837 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SSBP1Q04837 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.28□□□□□ -0.12
SSBP1Q04837 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP1Q04837 ACTG1P4-201ENST00000425123 1122 ntBASIC14.28□□□□□ -0.12
SSBP1Q04837 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP1Q04837 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 AC010491.1-201ENST00000563101 2797 ntBASIC14.28□□□□□ -0.12
SSBP1Q04837 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SSBP1Q04837 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.28□□□□□ -0.12
SSBP1Q04837 AC010947.1-201ENST00000623454 693 ntBASIC14.28□□□□□ -0.12
SSBP1Q04837 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SSBP1Q04837 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSBP1Q04837 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.27□□□□□ -0.12
SSBP1Q04837 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SSBP1Q04837 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.27□□□□□ -0.12
SSBP1Q04837 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.27□□□□□ -0.12
SSBP1Q04837 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.27□□□□□ -0.12
SSBP1Q04837 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SSBP1Q04837 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSBP1Q04837 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SSBP1Q04837 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.27□□□□□ -0.13
SSBP1Q04837 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.27□□□□□ -0.13
SSBP1Q04837 AP002414.1-201ENST00000391405 1147 ntBASIC14.27□□□□□ -0.13
SSBP1Q04837 KLF4P1-201ENST00000412782 1185 ntBASIC14.27□□□□□ -0.13
SSBP1Q04837 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SSBP1Q04837 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSBP1Q04837 FAM201B-201ENST00000458407 597 ntBASIC14.27□□□□□ -0.13
SSBP1Q04837 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.27□□□□□ -0.13
SSBP1Q04837 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSBP1Q04837 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms