Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HMGCS1Q01581 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HMGCS1Q01581 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 DUSP5P1-201ENST00000441325 1139 ntBASIC16.25■□□□□ 0.19
HMGCS1Q01581 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.25■□□□□ 0.19
HMGCS1Q01581 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 MTDHP4-201ENST00000600287 670 ntBASIC16.25■□□□□ 0.19
HMGCS1Q01581 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HMGCS1Q01581 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HMGCS1Q01581 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 AC006277.1-201ENST00000624348 1610 ntBASIC16.24■□□□□ 0.19
HMGCS1Q01581 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 AKR1C7P-201ENST00000305623 895 ntBASIC16.24■□□□□ 0.19
HMGCS1Q01581 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 AC139887.3-201ENST00000568585 713 ntBASIC16.24■□□□□ 0.19
HMGCS1Q01581 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.24■□□□□ 0.19
HMGCS1Q01581 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HMGCS1Q01581 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
HMGCS1Q01581 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms