Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC108073.2-201ENST00000464002 357 ntBASIC16.41■□□□□ 0.22
AP1S2P56377 AC092910.1-201ENST00000482027 1129 ntBASIC16.41■□□□□ 0.22
AP1S2P56377 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S2P56377 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP1S2P56377 AC010654.1-201ENST00000615722 808 ntBASIC16.41■□□□□ 0.22
AP1S2P56377 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S2P56377 AP001350.2-201ENST00000625104 1094 ntBASIC16.41■□□□□ 0.22
AP1S2P56377 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S2P56377 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S2P56377 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S2P56377 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.4■□□□□ 0.22
AP1S2P56377 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP1S2P56377 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 MRPL3P1-201ENST00000400109 1033 ntBASIC16.4■□□□□ 0.22
AP1S2P56377 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 RNA5SP419-201ENST00000515908 135 ntBASIC16.4■□□□□ 0.22
AP1S2P56377 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.4■□□□□ 0.22
AP1S2P56377 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.4■□□□□ 0.22
AP1S2P56377 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.4■□□□□ 0.22
AP1S2P56377 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 SLC25A6P4-201ENST00000586535 553 ntBASIC16.4■□□□□ 0.22
AP1S2P56377 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.4■□□□□ 0.22
AP1S2P56377 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 PCDHA14-201ENST00000506751 2298 ntBASIC16.4■□□□□ 0.22
AP1S2P56377 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S2P56377 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S2P56377 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP1S2P56377 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
AP1S2P56377 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
AP1S2P56377 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.39■□□□□ 0.22
AP1S2P56377 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.39■□□□□ 0.21
AP1S2P56377 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
AP1S2P56377 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
AP1S2P56377 AL049840.3-201ENST00000602669 611 ntBASIC16.39■□□□□ 0.21
AP1S2P56377 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
AP1S2P56377 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S2P56377 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms