Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN4P51793 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN4P51793 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.62■□□□□ 0.41
CLCN4P51793 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN4P51793 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.62■□□□□ 0.41
CLCN4P51793 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLCN4P51793 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.62■□□□□ 0.41
CLCN4P51793 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN4P51793 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN4P51793 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.62■□□□□ 0.41
CLCN4P51793 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLCN4P51793 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLCN4P51793 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 AC009118.2-201ENST00000613275 655 ntBASIC17.61■□□□□ 0.41
CLCN4P51793 AC007967.4-201ENST00000614700 386 ntBASIC17.61■□□□□ 0.41
CLCN4P51793 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 AC116353.5-201ENST00000638148 1699 ntBASIC17.61■□□□□ 0.41
CLCN4P51793 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
CLCN4P51793 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLCN4P51793 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLCN4P51793 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
CLCN4P51793 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLCN4P51793 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN4P51793 GK-202ENST00000378941 458 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN4P51793 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLCN4P51793 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.6■□□□□ 0.41
CLCN4P51793 KRT18P34-201ENST00000488218 1270 ntBASIC17.6■□□□□ 0.41
CLCN4P51793 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN4P51793 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.6■□□□□ 0.41
CLCN4P51793 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 AC003101.2-201ENST00000612557 442 ntBASIC17.6■□□□□ 0.41
CLCN4P51793 SPDYE12P-201ENST00000618416 771 ntBASIC17.6■□□□□ 0.41
CLCN4P51793 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.6■□□□□ 0.41
CLCN4P51793 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN4P51793 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN4P51793 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLCN4P51793 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CLCN4P51793 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN4P51793 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN4P51793 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN4P51793 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.59■□□□□ 0.41
CLCN4P51793 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN4P51793 AL138688.1-201ENST00000624851 1594 ntBASIC17.59■□□□□ 0.41
CLCN4P51793 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN4P51793 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CLCN4P51793 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN4P51793 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms