Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPFP49454 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CENPFP49454 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
CENPFP49454 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CENPFP49454 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CENPFP49454 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CENPFP49454 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.73■□□□□ 0.59
CENPFP49454 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
CENPFP49454 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
CENPFP49454 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.72■□□□□ 0.59
CENPFP49454 AL079307.3-201ENST00000556114 283 ntBASIC18.72■□□□□ 0.59
CENPFP49454 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CENPFP49454 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CENPFP49454 AC108725.1-201ENST00000495472 409 ntBASIC18.72■□□□□ 0.59
CENPFP49454 MIR6727-201ENST00000620702 65 ntBASIC18.72■□□□□ 0.59
CENPFP49454 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 AC120498.9-201ENST00000339021 3867 ntBASIC18.71■□□□□ 0.59
CENPFP49454 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPFP49454 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CENPFP49454 MIR8072-201ENST00000614241 80 ntBASIC18.71■□□□□ 0.59
CENPFP49454 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 TNXA-203ENST00000507684 2038 ntBASIC18.71■□□□□ 0.59
CENPFP49454 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPFP49454 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.71■□□□□ 0.59
CENPFP49454 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 HLA-H-201ENST00000383620 1096 ntBASIC18.71■□□□□ 0.59
CENPFP49454 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CENPFP49454 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.71■□□□□ 0.59
CENPFP49454 RNA5SP412-201ENST00000516234 123 ntBASIC18.71■□□□□ 0.59
CENPFP49454 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.71■□□□□ 0.59
CENPFP49454 SRD5A3P1-201ENST00000603021 949 ntBASIC18.71■□□□□ 0.59
CENPFP49454 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPFP49454 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
CENPFP49454 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPFP49454 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 AC243960.2-201ENST00000600996 747 ntBASIC18.7■□□□□ 0.58
CENPFP49454 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPFP49454 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CENPFP49454 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.7■□□□□ 0.58
CENPFP49454 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.7■□□□□ 0.58
CENPFP49454 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 NEFHP1-201ENST00000412845 2629 ntBASIC18.7■□□□□ 0.58
CENPFP49454 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPFP49454 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 AC018470.1-201ENST00000624790 3129 ntBASIC18.7■□□□□ 0.58
CENPFP49454 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPFP49454 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.7■□□□□ 0.58
CENPFP49454 PRYP6-201ENST00000514804 343 ntBASIC18.7■□□□□ 0.58
CENPFP49454 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.7■□□□□ 0.58
CENPFP49454 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPFP49454 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CENPFP49454 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPFP49454 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms