Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 FAM58CP-201ENST00000435741 640 ntBASIC19.77■□□□□ 0.76
NEDD4P46934 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.77■□□□□ 0.76
NEDD4P46934 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 AL009183.1-201ENST00000603760 355 ntBASIC19.77■□□□□ 0.76
NEDD4P46934 AP001350.2-201ENST00000625104 1094 ntBASIC19.77■□□□□ 0.76
NEDD4P46934 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.77■□□□□ 0.76
NEDD4P46934 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.77■□□□□ 0.76
NEDD4P46934 AL512652.2-201ENST00000625156 1716 ntBASIC19.77■□□□□ 0.76
NEDD4P46934 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.77■□□□□ 0.76
NEDD4P46934 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.77■□□□□ 0.76
NEDD4P46934 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NEDD4P46934 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.77■□□□□ 0.75
NEDD4P46934 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 RPSAP43-201ENST00000402237 625 ntBASIC19.76■□□□□ 0.75
NEDD4P46934 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.76■□□□□ 0.75
NEDD4P46934 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.76■□□□□ 0.75
NEDD4P46934 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD4P46934 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.76■□□□□ 0.75
NEDD4P46934 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 AC092902.6-201ENST00000641783 218 ntBASIC19.76■□□□□ 0.75
NEDD4P46934 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD4P46934 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD4P46934 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NEDD4P46934 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
NEDD4P46934 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.76■□□□□ 0.75
NEDD4P46934 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.76■□□□□ 0.75
NEDD4P46934 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.76■□□□□ 0.75
NEDD4P46934 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 MTDHP5-201ENST00000598980 586 ntBASIC19.76■□□□□ 0.75
NEDD4P46934 AL139011.1-202ENST00000642063 584 ntBASIC19.76■□□□□ 0.75
NEDD4P46934 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NEDD4P46934 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEDD4P46934 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NEDD4P46934 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD4P46934 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD4P46934 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 KRT8P39-201ENST00000396270 1433 ntBASIC19.75■□□□□ 0.75
NEDD4P46934 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NEDD4P46934 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.75■□□□□ 0.75
NEDD4P46934 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
NEDD4P46934 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 KRT18P13-201ENST00000400056 1290 ntBASIC19.75■□□□□ 0.75
NEDD4P46934 ADH5P3-201ENST00000433842 1137 ntBASIC19.75■□□□□ 0.75
NEDD4P46934 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.75■□□□□ 0.75
NEDD4P46934 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.75■□□□□ 0.75
NEDD4P46934 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.75■□□□□ 0.75
NEDD4P46934 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
NEDD4P46934 C20orf181-201ENST00000623918 480 ntBASIC19.75■□□□□ 0.75
NEDD4P46934 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEDD4P46934 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms