Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.59□□□□□ -0.07
CBX5P45973 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.59□□□□□ -0.07
CBX5P45973 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CBX5P45973 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CBX5P45973 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CBX5P45973 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.58□□□□□ -0.07
CBX5P45973 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CBX5P45973 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CBX5P45973 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CBX5P45973 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CBX5P45973 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CBX5P45973 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CBX5P45973 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 CYP2D8P-201ENST00000433633 1490 ntBASIC14.58□□□□□ -0.08
CBX5P45973 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.58□□□□□ -0.08
CBX5P45973 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CBX5P45973 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.58□□□□□ -0.08
CBX5P45973 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.58□□□□□ -0.08
CBX5P45973 AP003733.1-201ENST00000491725 852 ntBASIC14.58□□□□□ -0.08
CBX5P45973 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.58□□□□□ -0.08
CBX5P45973 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 AL355075.4-201ENST00000554988 638 ntBASIC14.58□□□□□ -0.08
CBX5P45973 AC109462.3-201ENST00000573934 613 ntBASIC14.58□□□□□ -0.08
CBX5P45973 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.58□□□□□ -0.08
CBX5P45973 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 AC079602.3-201ENST00000623931 403 ntBASIC14.58□□□□□ -0.08
CBX5P45973 AC141257.4-201ENST00000634557 245 ntBASIC14.58□□□□□ -0.08
CBX5P45973 AC136944.6-201ENST00000634818 245 ntBASIC14.58□□□□□ -0.08
CBX5P45973 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CBX5P45973 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CBX5P45973 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CBX5P45973 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CBX5P45973 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.57□□□□□ -0.08
CBX5P45973 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CBX5P45973 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.57□□□□□ -0.08
CBX5P45973 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CBX5P45973 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CBX5P45973 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CBX5P45973 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms