Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.28□□□□□ -0.12
VAMP1P23763 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.28□□□□□ -0.12
VAMP1P23763 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.28□□□□□ -0.12
VAMP1P23763 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.28□□□□□ -0.12
VAMP1P23763 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.28□□□□□ -0.12
VAMP1P23763 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 AL359736.2-201ENST00000621992 437 ntBASIC14.28□□□□□ -0.12
VAMP1P23763 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VAMP1P23763 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.27□□□□□ -0.12
VAMP1P23763 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.27□□□□□ -0.12
VAMP1P23763 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.27□□□□□ -0.12
VAMP1P23763 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VAMP1P23763 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.27□□□□□ -0.12
VAMP1P23763 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.27□□□□□ -0.12
VAMP1P23763 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 MTHFR-217ENST00000641820 1569 ntBASIC14.27□□□□□ -0.12
VAMP1P23763 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VAMP1P23763 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VAMP1P23763 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
VAMP1P23763 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 UNC93B2-201ENST00000285383 730 ntBASIC14.27□□□□□ -0.13
VAMP1P23763 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VAMP1P23763 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 C2orf69P3-201ENST00000565542 1120 ntBASIC14.27□□□□□ -0.13
VAMP1P23763 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.27□□□□□ -0.13
VAMP1P23763 AC026471.5-201ENST00000615068 467 ntBASIC14.27□□□□□ -0.13
VAMP1P23763 AC004263.2-201ENST00000617183 678 ntBASIC14.27□□□□□ -0.13
VAMP1P23763 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.27□□□□□ -0.13
VAMP1P23763 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VAMP1P23763 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VAMP1P23763 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 AC006538.1-201ENST00000567905 1585 ntBASIC14.26□□□□□ -0.13
VAMP1P23763 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VAMP1P23763 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.26□□□□□ -0.13
VAMP1P23763 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 ABHD17AP1-201ENST00000358206 933 ntBASIC14.26□□□□□ -0.13
VAMP1P23763 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.26□□□□□ -0.13
VAMP1P23763 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.26□□□□□ -0.13
VAMP1P23763 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.26□□□□□ -0.13
VAMP1P23763 AC113410.3-201ENST00000623366 203 ntBASIC14.26□□□□□ -0.13
VAMP1P23763 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
VAMP1P23763 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.26□□□□□ -0.13
VAMP1P23763 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.26□□□□□ -0.13
VAMP1P23763 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VAMP1P23763 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms