Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 NFIC-211ENST00000641145 8399 ntBASIC14.33□□□□□ -0.12
HIST1H1DP16402 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AC091607.1-201ENST00000490318 1060 ntBASIC14.33□□□□□ -0.12
HIST1H1DP16402 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AC148477.5-201ENST00000625164 1645 ntBASIC14.33□□□□□ -0.12
HIST1H1DP16402 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H1DP16402 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H1DP16402 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 TP73-AS1-210ENST00000637775 1455 ntBASIC14.32□□□□□ -0.12
HIST1H1DP16402 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 AL020989.1-201ENST00000422979 469 ntBASIC14.32□□□□□ -0.12
HIST1H1DP16402 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 AC013467.2-201ENST00000605472 835 ntBASIC14.32□□□□□ -0.12
HIST1H1DP16402 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.32□□□□□ -0.12
HIST1H1DP16402 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H1DP16402 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H1DP16402 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AC006277.1-201ENST00000624348 1610 ntBASIC14.31□□□□□ -0.12
HIST1H1DP16402 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.31□□□□□ -0.12
HIST1H1DP16402 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.31□□□□□ -0.12
HIST1H1DP16402 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms