Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFD2P13995 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFD2P13995 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.41■□□□□ 0.22
MTHFD2P13995 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.41■□□□□ 0.22
MTHFD2P13995 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.41■□□□□ 0.22
MTHFD2P13995 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTHFD2P13995 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 RPS2P1-201ENST00000434010 821 ntBASIC16.4■□□□□ 0.22
MTHFD2P13995 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFD2P13995 RPS15P9-201ENST00000494093 319 ntBASIC16.4■□□□□ 0.22
MTHFD2P13995 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFD2P13995 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFD2P13995 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.4■□□□□ 0.22
MTHFD2P13995 LINC01711-201ENST00000598340 967 ntBASIC16.4■□□□□ 0.22
MTHFD2P13995 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.4■□□□□ 0.22
MTHFD2P13995 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MTHFD2P13995 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MTHFD2P13995 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MTHFD2P13995 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.39■□□□□ 0.22
MTHFD2P13995 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
MTHFD2P13995 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MTHFD2P13995 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.39■□□□□ 0.21
MTHFD2P13995 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
MTHFD2P13995 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFD2P13995 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MTHFD2P13995 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFD2P13995 AC008741.2-201ENST00000612792 3115 ntBASIC16.39■□□□□ 0.21
MTHFD2P13995 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MTHFD2P13995 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFD2P13995 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.38■□□□□ 0.21
MTHFD2P13995 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
MTHFD2P13995 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFD2P13995 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFD2P13995 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms