Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 RPS2P28-201ENST00000314255 741 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 AL031284.1-201ENST00000419297 478 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 AC009078.2-202ENST00000463353 338 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 AC092910.1-201ENST00000482027 1129 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 RNA5SP419-201ENST00000515908 135 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 REXO1L3P-201ENST00000622202 1288 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 HLA-A-202ENST00000376806 1854 ntBASIC15.12■□□□□ 0.01
HLA-DOBP13765 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DOBP13765 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DOBP13765 TOP3BP1-201ENST00000420768 1380 ntBASIC15.11■□□□□ 0.01
HLA-DOBP13765 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 TPM4P1-201ENST00000436100 807 ntBASIC15.11■□□□□ 0.01
HLA-DOBP13765 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 IGHV3-65-201ENST00000523210 341 ntBASIC15.11■□□□□ 0.01
HLA-DOBP13765 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 AC008667.4-201ENST00000607370 168 ntBASIC15.11■□□□□ 0.01
HLA-DOBP13765 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 AC117500.6-201ENST00000624871 588 ntBASIC15.11■□□□□ 0.01
HLA-DOBP13765 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DOBP13765 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DOBP13765 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 LINC00895-201ENST00000629028 1637 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AP002490.2-201ENST00000524791 560 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 SLC25A6P4-201ENST00000586535 553 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AL121894.2-201ENST00000602977 491 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 AC005593.1-201ENST00000624894 515 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.1■□□□□ 0.01
HLA-DOBP13765 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DOBP13765 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DOBP13765 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms