Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UBCP0CG48 SIGLEC16-201ENST00000599858 1437 ntBASIC14.83□□□□□ -0.03
UBCP0CG48 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.83□□□□□ -0.03
UBCP0CG48 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBCP0CG48 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBCP0CG48 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.83□□□□□ -0.03
UBCP0CG48 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UBCP0CG48 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 AC005052.1-201ENST00000625181 2492 ntBASIC14.83□□□□□ -0.04
UBCP0CG48 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
UBCP0CG48 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.83□□□□□ -0.04
UBCP0CG48 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 RCN1P2-201ENST00000398357 915 ntBASIC14.83□□□□□ -0.04
UBCP0CG48 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.83□□□□□ -0.04
UBCP0CG48 FAM86EP-206ENST00000510506 987 ntBASIC14.83□□□□□ -0.04
UBCP0CG48 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.83□□□□□ -0.04
UBCP0CG48 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.83□□□□□ -0.04
UBCP0CG48 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBCP0CG48 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.83□□□□□ -0.04
UBCP0CG48 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBCP0CG48 HYMAI-201ENST00000635591 3347 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
UBCP0CG48 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 AC097637.2-201ENST00000624096 1997 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 AP002414.1-201ENST00000391405 1147 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 POM121L3P-201ENST00000419331 1163 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
UBCP0CG48 LINC00265-3P-201ENST00000447588 903 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 DUX4L17-201ENST00000557360 1267 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 AP002414.4-201ENST00000589764 1148 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 AC116407.4-201ENST00000623319 1061 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.82□□□□□ -0.04
UBCP0CG48 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
UBCP0CG48 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBCP0CG48 AL513523.2-202ENST00000427283 2040 ntBASIC14.82□□□□□ -0.04
UBCP0CG48 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBCP0CG48 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBCP0CG48 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms