Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 AC079140.1-201ENST00000508039 487 ntBASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 AL135744.1-201ENST00000565098 629 ntBASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 AC015911.4-201ENST00000588022 1070 ntBASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40ALP0C0E4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AC092474.2-201ENST00000424288 719 ntBASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AC109322.1-201ENST00000524499 1264 ntBASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AC243562.1-201ENST00000560672 389 ntBASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AC093520.2-201ENST00000561830 333 ntBASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 MIR3909-201ENST00000579518 119 ntBASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40ALP0C0E4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 AL138688.1-201ENST00000624851 1594 ntBASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB40ALP0C0E4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms