Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MMP2P08253 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MMP2P08253 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 RNU1-129P-201ENST00000384064 167 ntBASIC16.91■□□□□ 0.3
MMP2P08253 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP2P08253 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP2P08253 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 U1.21-201ENST00000580816 167 ntBASIC16.91■□□□□ 0.3
MMP2P08253 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MMP2P08253 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MMP2P08253 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP2P08253 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 ALOX12P2-203ENST00000570921 1945 ntBASIC16.9■□□□□ 0.3
MMP2P08253 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.9■□□□□ 0.3
MMP2P08253 AL118508.1-201ENST00000613502 2345 ntBASIC16.9■□□□□ 0.3
MMP2P08253 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.9■□□□□ 0.3
MMP2P08253 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.9■□□□□ 0.3
MMP2P08253 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
MMP2P08253 RNA5SP416-201ENST00000516838 111 ntBASIC16.9■□□□□ 0.3
MMP2P08253 PGAM5P1-201ENST00000518923 814 ntBASIC16.9■□□□□ 0.3
MMP2P08253 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.9■□□□□ 0.3
MMP2P08253 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.9■□□□□ 0.3
MMP2P08253 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 AC007064.4-201ENST00000637740 555 ntBASIC16.9■□□□□ 0.3
MMP2P08253 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP2P08253 AC090340.1-201ENST00000620778 4980 ntBASIC16.9■□□□□ 0.3
MMP2P08253 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP2P08253 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
MMP2P08253 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
MMP2P08253 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MMP2P08253 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
MMP2P08253 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
MMP2P08253 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 GGT3P-204ENST00000453783 1664 ntBASIC16.89■□□□□ 0.29
MMP2P08253 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 MIR940-201ENST00000401276 94 ntBASIC16.89■□□□□ 0.29
MMP2P08253 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 POLD2P1-201ENST00000511220 997 ntBASIC16.89■□□□□ 0.29
MMP2P08253 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
MMP2P08253 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.89■□□□□ 0.29
MMP2P08253 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.89■□□□□ 0.29
MMP2P08253 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MMP2P08253 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.89■□□□□ 0.29
MMP2P08253 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MMP2P08253 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms