Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TUBB4AP04350 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TUBB4AP04350 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.09■□□□□ 0.49
TUBB4AP04350 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.09■□□□□ 0.49
TUBB4AP04350 AL136038.4-201ENST00000603606 1261 ntBASIC18.09■□□□□ 0.49
TUBB4AP04350 AC026471.5-201ENST00000615068 467 ntBASIC18.09■□□□□ 0.49
TUBB4AP04350 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
TUBB4AP04350 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TUBB4AP04350 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.09■□□□□ 0.49
TUBB4AP04350 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TUBB4AP04350 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TUBB4AP04350 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 AL353692.3-201ENST00000407031 1396 ntBASIC18.08■□□□□ 0.49
TUBB4AP04350 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.08■□□□□ 0.49
TUBB4AP04350 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TUBB4AP04350 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TUBB4AP04350 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.08■□□□□ 0.49
TUBB4AP04350 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.08■□□□□ 0.49
TUBB4AP04350 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TUBB4AP04350 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TUBB4AP04350 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.08■□□□□ 0.48
TUBB4AP04350 IGHGP-201ENST00000390555 1178 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.08■□□□□ 0.48
TUBB4AP04350 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.08■□□□□ 0.48
TUBB4AP04350 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.08■□□□□ 0.48
TUBB4AP04350 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 MIR4785-201ENST00000585005 73 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.08■□□□□ 0.48
TUBB4AP04350 AC113410.3-201ENST00000623366 203 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 CDC14C-201ENST00000428251 1719 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TUBB4AP04350 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 AC006277.1-201ENST00000624348 1610 ntBASIC18.08■□□□□ 0.48
TUBB4AP04350 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.08■□□□□ 0.48
TUBB4AP04350 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.08■□□□□ 0.48
TUBB4AP04350 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TUBB4AP04350 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TUBB4AP04350 AL353593.2-201ENST00000602529 1483 ntBASIC18.07■□□□□ 0.48
TUBB4AP04350 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.07■□□□□ 0.48
TUBB4AP04350 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TUBB4AP04350 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBB4AP04350 KRT8P10-201ENST00000450021 1447 ntBASIC18.07■□□□□ 0.48
TUBB4AP04350 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBB4AP04350 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBB4AP04350 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
TUBB4AP04350 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TUBB4AP04350 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.07■□□□□ 0.48
TUBB4AP04350 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms