Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
MT-ND1P03886 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MT-ND1P03886 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.95■□□□□ 0.14
MT-ND1P03886 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 DUX4L26-201ENST00000489078 1255 ntBASIC15.95■□□□□ 0.14
MT-ND1P03886 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
MT-ND1P03886 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.95■□□□□ 0.14
MT-ND1P03886 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MT-ND1P03886 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.95■□□□□ 0.14
MT-ND1P03886 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
MT-ND1P03886 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MT-ND1P03886 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MT-ND1P03886 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.94■□□□□ 0.14
MT-ND1P03886 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 RN7SL850P-201ENST00000579959 291 ntBASIC15.94■□□□□ 0.14
MT-ND1P03886 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
MT-ND1P03886 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MT-ND1P03886 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.94■□□□□ 0.14
MT-ND1P03886 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.94■□□□□ 0.14
MT-ND1P03886 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
MT-ND1P03886 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 RCN1P1-201ENST00000400413 996 ntBASIC15.93■□□□□ 0.14
MT-ND1P03886 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MT-ND1P03886 TSPY22P-201ENST00000427496 604 ntBASIC15.93■□□□□ 0.14
MT-ND1P03886 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms