Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
SIX6O95475 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.15□□□□□ -0.14
SIX6O95475 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 FAM197Y1-201ENST00000421178 764 ntBASIC14.15□□□□□ -0.14
SIX6O95475 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
SIX6O95475 AP002490.2-201ENST00000524791 560 ntBASIC14.15□□□□□ -0.14
SIX6O95475 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.15□□□□□ -0.14
SIX6O95475 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.15□□□□□ -0.14
SIX6O95475 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.15□□□□□ -0.14
SIX6O95475 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.15□□□□□ -0.14
SIX6O95475 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SIX6O95475 AC024243.1-201ENST00000609234 778 ntBASIC14.15□□□□□ -0.14
SIX6O95475 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.15□□□□□ -0.14
SIX6O95475 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SIX6O95475 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SIX6O95475 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SIX6O95475 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SIX6O95475 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SIX6O95475 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.14□□□□□ -0.15
SIX6O95475 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 AP005117.1-202ENST00000581724 1908 ntBASIC14.14□□□□□ -0.15
SIX6O95475 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.14□□□□□ -0.15
SIX6O95475 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.14□□□□□ -0.15
SIX6O95475 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.14□□□□□ -0.15
SIX6O95475 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SIX6O95475 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SIX6O95475 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SIX6O95475 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SIX6O95475 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SIX6O95475 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.13□□□□□ -0.15
SIX6O95475 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.13□□□□□ -0.15
SIX6O95475 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SIX6O95475 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms