Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NKX2-2O95096 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
NKX2-2O95096 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
NKX2-2O95096 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.53■□□□□ 0.08
NKX2-2O95096 AC012569.1-201ENST00000591191 1524 ntBASIC15.53■□□□□ 0.08
NKX2-2O95096 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX2-2O95096 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX2-2O95096 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.52■□□□□ 0.08
NKX2-2O95096 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NKX2-2O95096 AC124067.4-201ENST00000519691 2379 ntBASIC15.52■□□□□ 0.08
NKX2-2O95096 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.52■□□□□ 0.08
NKX2-2O95096 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX2-2O95096 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.52■□□□□ 0.08
NKX2-2O95096 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX2-2O95096 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.52■□□□□ 0.07
NKX2-2O95096 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NKX2-2O95096 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.52■□□□□ 0.07
NKX2-2O95096 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
NKX2-2O95096 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX2-2O95096 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX2-2O95096 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.52■□□□□ 0.07
NKX2-2O95096 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX2-2O95096 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
NKX2-2O95096 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.52■□□□□ 0.07
NKX2-2O95096 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 OR6D1P-203ENST00000641209 4860 ntBASIC15.51■□□□□ 0.07
NKX2-2O95096 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX2-2O95096 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.51■□□□□ 0.07
NKX2-2O95096 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX2-2O95096 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 IL9RP2-201ENST00000423948 1312 ntBASIC15.51■□□□□ 0.07
NKX2-2O95096 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.51■□□□□ 0.07
NKX2-2O95096 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NKX2-2O95096 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
NKX2-2O95096 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.51■□□□□ 0.07
NKX2-2O95096 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 AC034105.1-201ENST00000563488 319 ntBASIC15.51■□□□□ 0.07
NKX2-2O95096 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX2-2O95096 AC104109.2-201ENST00000602919 1418 ntBASIC15.51■□□□□ 0.07
NKX2-2O95096 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX2-2O95096 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NKX2-2O95096 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
NKX2-2O95096 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX2-2O95096 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NKX2-2O95096 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX2-2O95096 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
NKX2-2O95096 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.5■□□□□ 0.07
NKX2-2O95096 RHOQP3-201ENST00000437982 621 ntBASIC15.5■□□□□ 0.07
NKX2-2O95096 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX2-2O95096 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX2-2O95096 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX2-2O95096 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.5■□□□□ 0.07
NKX2-2O95096 AC096734.2-201ENST00000562054 433 ntBASIC15.5■□□□□ 0.07
NKX2-2O95096 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX2-2O95096 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NKX2-2O95096 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.5■□□□□ 0.07
NKX2-2O95096 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.5■□□□□ 0.07
NKX2-2O95096 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms