Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LTN1O94822 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LTN1O94822 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 DFFBP1-201ENST00000433250 979 ntBASIC21.97■■□□□ 1.11
LTN1O94822 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.97■■□□□ 1.11
LTN1O94822 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.97■■□□□ 1.11
LTN1O94822 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LTN1O94822 AC138969.3-201ENST00000546612 1459 ntBASIC21.97■■□□□ 1.11
LTN1O94822 AC138932.2-201ENST00000548268 1459 ntBASIC21.97■■□□□ 1.11
LTN1O94822 AC126755.4-201ENST00000549796 1459 ntBASIC21.97■■□□□ 1.11
LTN1O94822 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 SPDYE19P-201ENST00000338590 713 ntBASIC21.97■■□□□ 1.11
LTN1O94822 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LTN1O94822 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.97■■□□□ 1.11
LTN1O94822 AC008494.3-201ENST00000606615 944 ntBASIC21.97■■□□□ 1.11
LTN1O94822 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
LTN1O94822 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LTN1O94822 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LTN1O94822 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.97■■□□□ 1.11
LTN1O94822 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
LTN1O94822 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.96■■□□□ 1.11
LTN1O94822 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.96■■□□□ 1.11
LTN1O94822 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.96■■□□□ 1.11
LTN1O94822 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LTN1O94822 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LTN1O94822 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.96■■□□□ 1.11
LTN1O94822 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.96■■□□□ 1.11
LTN1O94822 AC055876.2-201ENST00000531834 546 ntBASIC21.96■■□□□ 1.11
LTN1O94822 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21.96■■□□□ 1.11
LTN1O94822 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.96■■□□□ 1.11
LTN1O94822 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
LTN1O94822 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LTN1O94822 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
LTN1O94822 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LTN1O94822 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
LTN1O94822 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LTN1O94822 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 MIR1909-201ENST00000411312 80 ntBASIC21.95■■□□□ 1.1
LTN1O94822 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.95■■□□□ 1.1
LTN1O94822 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LTN1O94822 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC21.95■■□□□ 1.1
LTN1O94822 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 AL109936.8-201ENST00000641772 604 ntBASIC21.95■■□□□ 1.1
LTN1O94822 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.95■■□□□ 1.1
LTN1O94822 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
LTN1O94822 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.95■■□□□ 1.1
LTN1O94822 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LTN1O94822 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.94■■□□□ 1.1
LTN1O94822 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LTN1O94822 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LTN1O94822 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.94■■□□□ 1.1
LTN1O94822 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms