Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST1O76090 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BEST1O76090 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 UBALD1-205ENST00000590891 2641 ntBASIC17.62■□□□□ 0.41
BEST1O76090 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 PMS2P4-201ENST00000412466 1052 ntBASIC17.62■□□□□ 0.41
BEST1O76090 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST1O76090 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST1O76090 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
BEST1O76090 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 KRT8P48-201ENST00000515599 1220 ntBASIC17.62■□□□□ 0.41
BEST1O76090 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST1O76090 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.62■□□□□ 0.41
BEST1O76090 AL596442.2-201ENST00000610240 980 ntBASIC17.62■□□□□ 0.41
BEST1O76090 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BEST1O76090 AC105339.1-204ENST00000636249 355 ntBASIC17.62■□□□□ 0.41
BEST1O76090 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.62■□□□□ 0.41
BEST1O76090 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 KRT8P39-201ENST00000396270 1433 ntBASIC17.62■□□□□ 0.41
BEST1O76090 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
BEST1O76090 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.62■□□□□ 0.41
BEST1O76090 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BEST1O76090 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 AL512652.2-201ENST00000625156 1716 ntBASIC17.61■□□□□ 0.41
BEST1O76090 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST1O76090 MIR3909-201ENST00000579518 119 ntBASIC17.61■□□□□ 0.41
BEST1O76090 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST1O76090 AP001160.2-201ENST00000596071 487 ntBASIC17.61■□□□□ 0.41
BEST1O76090 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.61■□□□□ 0.41
BEST1O76090 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 AD000864.1-201ENST00000624076 2295 ntBASIC17.61■□□□□ 0.41
BEST1O76090 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.61■□□□□ 0.41
BEST1O76090 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 FLJ38576-201ENST00000623820 2459 ntBASIC17.61■□□□□ 0.41
BEST1O76090 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.61■□□□□ 0.41
BEST1O76090 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
BEST1O76090 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BEST1O76090 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 AC092171.3-201ENST00000610122 2651 ntBASIC17.6■□□□□ 0.41
BEST1O76090 AC011676.5-201ENST00000624864 2660 ntBASIC17.6■□□□□ 0.41
BEST1O76090 HCG11-201ENST00000411553 5696 ntBASIC17.6■□□□□ 0.41
BEST1O76090 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST1O76090 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
BEST1O76090 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST1O76090 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST1O76090 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
BEST1O76090 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
BEST1O76090 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST1O76090 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST1O76090 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST1O76090 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms