Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLDN11O75508 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN11O75508 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN11O75508 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN11O75508 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CLDN11O75508 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.16■□□□□ 0.34
CLDN11O75508 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN11O75508 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 AL691403.2-201ENST00000618460 490 ntBASIC17.16■□□□□ 0.34
CLDN11O75508 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN11O75508 AC134684.3-201ENST00000641758 218 ntBASIC17.16■□□□□ 0.34
CLDN11O75508 AC079781.4-201ENST00000641908 219 ntBASIC17.16■□□□□ 0.34
CLDN11O75508 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.16■□□□□ 0.34
CLDN11O75508 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLDN11O75508 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN11O75508 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN11O75508 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN11O75508 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 AL355306.1-201ENST00000415580 579 ntBASIC17.15■□□□□ 0.34
CLDN11O75508 AL671277.1-201ENST00000429656 993 ntBASIC17.15■□□□□ 0.34
CLDN11O75508 AP006288.1-201ENST00000446065 395 ntBASIC17.15■□□□□ 0.34
CLDN11O75508 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN11O75508 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN11O75508 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN11O75508 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLDN11O75508 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN11O75508 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 SNX33P1-201ENST00000592116 1762 ntBASIC17.15■□□□□ 0.34
CLDN11O75508 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN11O75508 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN11O75508 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLDN11O75508 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.14■□□□□ 0.34
CLDN11O75508 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 AL671710.1-201ENST00000610245 2349 ntBASIC17.14■□□□□ 0.33
CLDN11O75508 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CLDN11O75508 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN11O75508 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.14■□□□□ 0.33
CLDN11O75508 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLDN11O75508 RARRES2P8-201ENST00000566335 367 ntBASIC17.14■□□□□ 0.33
CLDN11O75508 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLDN11O75508 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLDN11O75508 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN11O75508 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms