Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.11■□□□□ 0.17
LCMT2O60294 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.11■□□□□ 0.17
LCMT2O60294 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.11■□□□□ 0.17
LCMT2O60294 AC004877.2-201ENST00000623941 599 ntBASIC16.11■□□□□ 0.17
LCMT2O60294 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LCMT2O60294 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LCMT2O60294 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LCMT2O60294 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LCMT2O60294 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LCMT2O60294 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.1■□□□□ 0.17
LCMT2O60294 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.1■□□□□ 0.17
LCMT2O60294 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.1■□□□□ 0.17
LCMT2O60294 POLD2P1-201ENST00000511220 997 ntBASIC16.1■□□□□ 0.17
LCMT2O60294 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LCMT2O60294 MIR4515-201ENST00000584082 81 ntBASIC16.1■□□□□ 0.17
LCMT2O60294 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.1■□□□□ 0.17
LCMT2O60294 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCMT2O60294 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCMT2O60294 AC025580.3-201ENST00000617932 1424 ntBASIC16.1■□□□□ 0.17
LCMT2O60294 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 AC012569.1-201ENST00000591191 1524 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.09■□□□□ 0.17
LCMT2O60294 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LCMT2O60294 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.09■□□□□ 0.17
LCMT2O60294 RNA5SP416-201ENST00000516838 111 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 KRT18P58-201ENST00000527480 1120 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 CYP2A7P1-201ENST00000595391 815 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 AC092865.6-201ENST00000642101 219 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 BCAR1-209ENST00000546196 1340 ntBASIC16.09■□□□□ 0.17
LCMT2O60294 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LCMT2O60294 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.09■□□□□ 0.17
LCMT2O60294 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCMT2O60294 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms