Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCA5O60264 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 PRSS29P-201ENST00000440800 595 ntBASIC20.76■□□□□ 0.91
SMARCA5O60264 AC145285.3-201ENST00000564603 959 ntBASIC20.76■□□□□ 0.91
SMARCA5O60264 AC018845.2-201ENST00000568326 409 ntBASIC20.76■□□□□ 0.91
SMARCA5O60264 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCA5O60264 CYP2A7P1-201ENST00000595391 815 ntBASIC20.76■□□□□ 0.91
SMARCA5O60264 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.76■□□□□ 0.91
SMARCA5O60264 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMARCA5O60264 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.76■□□□□ 0.91
SMARCA5O60264 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMARCA5O60264 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCA5O60264 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCA5O60264 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.75■□□□□ 0.91
SMARCA5O60264 CRYGEP-201ENST00000412192 528 ntBASIC20.75■□□□□ 0.91
SMARCA5O60264 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 AC010507.1-201ENST00000633895 436 ntBASIC20.75■□□□□ 0.91
SMARCA5O60264 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 AL512652.2-201ENST00000625156 1716 ntBASIC20.75■□□□□ 0.91
SMARCA5O60264 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCA5O60264 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCA5O60264 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCA5O60264 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SMARCA5O60264 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCA5O60264 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 CXCL1P1-201ENST00000502804 216 ntBASIC20.74■□□□□ 0.91
SMARCA5O60264 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCA5O60264 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 AP002490.2-201ENST00000524791 560 ntBASIC20.74■□□□□ 0.91
SMARCA5O60264 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCA5O60264 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.74■□□□□ 0.91
SMARCA5O60264 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 BX640515.1-201ENST00000617215 977 ntBASIC20.74■□□□□ 0.91
SMARCA5O60264 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCA5O60264 AL353732.1-201ENST00000569618 1459 ntBASIC20.74■□□□□ 0.91
SMARCA5O60264 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCA5O60264 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCA5O60264 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCA5O60264 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCA5O60264 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCA5O60264 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms