Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATP2A1O14983 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2A1O14983 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2A1O14983 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.21■□□□□ 0.67
ATP2A1O14983 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A1O14983 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.21■□□□□ 0.67
ATP2A1O14983 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP2A1O14983 AC073389.1-201ENST00000595595 795 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 TUBB8P12-201ENST00000308911 1335 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 TUBB7P-202ENST00000428444 1305 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 TUBB8P7-204ENST00000567960 1332 ntBASIC19.21■□□□□ 0.67
ATP2A1O14983 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP2A1O14983 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP2A1O14983 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 AC142381.1-201ENST00000426099 345 ntBASIC19.2■□□□□ 0.66
ATP2A1O14983 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.2■□□□□ 0.66
ATP2A1O14983 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.2■□□□□ 0.66
ATP2A1O14983 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 AL138918.1-201ENST00000568306 659 ntBASIC19.2■□□□□ 0.66
ATP2A1O14983 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2A1O14983 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2A1O14983 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
ATP2A1O14983 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ATP2A1O14983 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2A1O14983 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATP2A1O14983 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A1O14983 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2A1O14983 MIR943-201ENST00000401286 94 ntBASIC19.19■□□□□ 0.66
ATP2A1O14983 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ATP2A1O14983 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2A1O14983 AC125807.1-201ENST00000483097 614 ntBASIC19.19■□□□□ 0.66
ATP2A1O14983 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2A1O14983 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.19■□□□□ 0.66
ATP2A1O14983 AC013467.2-201ENST00000605472 835 ntBASIC19.19■□□□□ 0.66
ATP2A1O14983 AL158211.3-201ENST00000607385 239 ntBASIC19.19■□□□□ 0.66
ATP2A1O14983 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A1O14983 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATP2A1O14983 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.19■□□□□ 0.66
ATP2A1O14983 CROCCP2-202ENST00000412962 2773 ntBASIC19.19■□□□□ 0.66
ATP2A1O14983 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2A1O14983 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2A1O14983 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2A1O14983 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2A1O14983 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2A1O14983 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms