Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
CHD2O14647 KRT8P39-201ENST00000396270 1433 ntBASIC22.97■■□□□ 1.27
CHD2O14647 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC22.97■■□□□ 1.27
CHD2O14647 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC22.97■■□□□ 1.27
CHD2O14647 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 RNA5SP412-201ENST00000516234 123 ntBASIC22.97■■□□□ 1.27
CHD2O14647 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC22.97■■□□□ 1.27
CHD2O14647 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC22.97■■□□□ 1.27
CHD2O14647 AC026979.3-201ENST00000607315 403 ntBASIC22.97■■□□□ 1.27
CHD2O14647 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC22.97■■□□□ 1.27
CHD2O14647 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.97■■□□□ 1.27
CHD2O14647 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD2O14647 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC22.96■■□□□ 1.27
CHD2O14647 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.96■■□□□ 1.27
CHD2O14647 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC22.96■■□□□ 1.27
CHD2O14647 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHD2O14647 AL162726.2-201ENST00000438986 1017 ntBASIC22.96■■□□□ 1.27
CHD2O14647 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC22.96■■□□□ 1.27
CHD2O14647 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC22.96■■□□□ 1.27
CHD2O14647 PARP8-218ENST00000513738 596 ntTSL 4 BASIC22.96■■□□□ 1.27
CHD2O14647 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC22.96■■□□□ 1.27
CHD2O14647 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC22.96■■□□□ 1.27
CHD2O14647 RN7SL219P-201ENST00000582872 296 ntBASIC22.96■■□□□ 1.27
CHD2O14647 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC22.96■■□□□ 1.27
CHD2O14647 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC22.96■■□□□ 1.27
CHD2O14647 AL139099.5-201ENST00000635274 300 ntBASIC22.96■■□□□ 1.27
CHD2O14647 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CHD2O14647 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.95■■□□□ 1.26
CHD2O14647 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC22.95■■□□□ 1.26
CHD2O14647 AC006277.1-201ENST00000624348 1610 ntBASIC22.95■■□□□ 1.26
CHD2O14647 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CHD2O14647 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC22.95■■□□□ 1.26
CHD2O14647 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC22.95■■□□□ 1.26
CHD2O14647 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.95■■□□□ 1.26
CHD2O14647 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.95■■□□□ 1.26
CHD2O14647 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD2O14647 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CHD2O14647 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 AC093525.8-201ENST00000624099 1342 ntBASIC22.94■■□□□ 1.26
CHD2O14647 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHD2O14647 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC22.94■■□□□ 1.26
CHD2O14647 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC22.94■■□□□ 1.26
CHD2O14647 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC22.94■■□□□ 1.26
CHD2O14647 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHD2O14647 AL589702.1-201ENST00000641229 1509 ntBASIC22.94■■□□□ 1.26
CHD2O14647 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.94■■□□□ 1.26
CHD2O14647 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 HAUS4P1-201ENST00000406739 1145 ntBASIC22.94■■□□□ 1.26
CHD2O14647 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHD2O14647 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC22.94■■□□□ 1.26
CHD2O14647 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC22.94■■□□□ 1.26
CHD2O14647 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 NME6-203ENST00000415644 849 ntTSL 2 BASIC22.93■■□□□ 1.26
CHD2O14647 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.93■■□□□ 1.26
CHD2O14647 KRT43P-201ENST00000434019 910 ntBASIC22.93■■□□□ 1.26
CHD2O14647 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC22.93■■□□□ 1.26
CHD2O14647 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHD2O14647 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC22.93■■□□□ 1.26
CHD2O14647 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC22.93■■□□□ 1.26
CHD2O14647 AL158212.4-201ENST00000624062 1286 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms