Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
AP3B1O00203 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.04■□□□□ 0.32
AP3B1O00203 AP001350.2-201ENST00000625104 1094 ntBASIC17.04■□□□□ 0.32
AP3B1O00203 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 CYP2T1P-202ENST00000641596 2535 ntBASIC17.04■□□□□ 0.32
AP3B1O00203 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
AP3B1O00203 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 PCDHB19P-201ENST00000570871 2371 ntBASIC17.03■□□□□ 0.32
AP3B1O00203 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
AP3B1O00203 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 AC129492.6-201ENST00000611383 1305 ntBASIC17.03■□□□□ 0.32
AP3B1O00203 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3B1O00203 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3B1O00203 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3B1O00203 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3B1O00203 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3B1O00203 AC073648.2-201ENST00000510116 352 ntBASIC17.03■□□□□ 0.32
AP3B1O00203 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3B1O00203 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3B1O00203 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3B1O00203 REXO1L3P-201ENST00000622202 1288 ntBASIC17.03■□□□□ 0.32
AP3B1O00203 PGM5P2-202ENST00000637225 1043 ntBASIC17.03■□□□□ 0.32
AP3B1O00203 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3B1O00203 AC002310.6-201ENST00000624451 1377 ntBASIC17.02■□□□□ 0.32
AP3B1O00203 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3B1O00203 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3B1O00203 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 AKR1C7P-201ENST00000305623 895 ntBASIC17.02■□□□□ 0.32
AP3B1O00203 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
AP3B1O00203 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.02■□□□□ 0.32
AP3B1O00203 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 AF238378.1-201ENST00000526806 358 ntBASIC17.02■□□□□ 0.32
AP3B1O00203 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
AP3B1O00203 MIR4492-201ENST00000581627 80 ntBASIC17.02■□□□□ 0.32
AP3B1O00203 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.02■□□□□ 0.32
AP3B1O00203 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP3B1O00203 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.02■□□□□ 0.32
AP3B1O00203 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3B1O00203 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3B1O00203 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.02■□□□□ 0.32
AP3B1O00203 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
AP3B1O00203 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
AP3B1O00203 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3B1O00203 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3B1O00203 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
AP3B1O00203 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.02■□□□□ 0.31
AP3B1O00203 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
AP3B1O00203 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
AP3B1O00203 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.02■□□□□ 0.31
AP3B1O00203 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.02■□□□□ 0.31
AP3B1O00203 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms