Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM6-TRIM34B2RNG4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM6-TRIM34B2RNG4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
TRIM6-TRIM34B2RNG4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AL031284.1-201ENST00000419297 478 ntBASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SLC25A6P2-201ENST00000497974 877 ntBASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC124067.4-201ENST00000519691 2379 ntBASIC20.64■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC005593.1-201ENST00000624894 515 ntBASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 MIR7706-201ENST00000613747 67 ntBASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GGTLC5P-201ENST00000617623 998 ntBASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM6-TRIM34B2RNG4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TOP3BP1-201ENST00000420768 1380 ntBASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM6-TRIM34B2RNG4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms