Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 AC027601.4-201ENST00000611259 610 ntBASIC17.14■□□□□ 0.33
CAPN8A6NHC0 FAM197Y3-203ENST00000618346 717 ntBASIC17.14■□□□□ 0.33
CAPN8A6NHC0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.14■□□□□ 0.33
CAPN8A6NHC0 AL596257.1-201ENST00000641463 2694 ntBASIC17.14■□□□□ 0.33
CAPN8A6NHC0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 AC104109.2-201ENST00000602919 1418 ntBASIC17.13■□□□□ 0.33
CAPN8A6NHC0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 AC092053.1-201ENST00000605787 1936 ntBASIC17.13■□□□□ 0.33
CAPN8A6NHC0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPN8A6NHC0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.12■□□□□ 0.33
CAPN8A6NHC0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 MRPL20P1-201ENST00000400819 433 ntBASIC17.12■□□□□ 0.33
CAPN8A6NHC0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 AC004967.1-201ENST00000453589 447 ntBASIC17.12■□□□□ 0.33
CAPN8A6NHC0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 AC055717.3-201ENST00000622967 595 ntBASIC17.12■□□□□ 0.33
CAPN8A6NHC0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN8A6NHC0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms