Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 AC067863.1-201ENST00000494933 530 ntBASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 LINC01225-203ENST00000563550 1244 ntBASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 MIR3909-201ENST00000579518 119 ntBASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3FA6NER0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 FAM8A3P-201ENST00000427218 844 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 CNN2P2-201ENST00000443536 909 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 CNN2P3-201ENST00000450201 906 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 MIR3197-201ENST00000582241 73 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 AL136317.3-201ENST00000618497 906 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 LINC00896-202ENST00000609602 2128 ntBASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.72■□□□□ 0.27
TBC1D3FA6NER0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 AC027307.2-201ENST00000591252 911 ntBASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3FA6NER0 AP001059.3-201ENST00000619053 235 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms