Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 SPDYE17-201ENST00000412399 783 ntBASIC19.33■□□□□ 0.69
SSC5DA1L4H1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 AC011495.1-201ENST00000498085 584 ntBASIC19.33■□□□□ 0.69
SSC5DA1L4H1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.33■□□□□ 0.69
SSC5DA1L4H1 AL109936.8-201ENST00000641772 604 ntBASIC19.33■□□□□ 0.69
SSC5DA1L4H1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.33■□□□□ 0.68
SSC5DA1L4H1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SSC5DA1L4H1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 SERBP1P3-201ENST00000459980 809 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 AL512343.1-201ENST00000605837 169 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 AL033527.5-202ENST00000641632 1098 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 ANKRD19P-201ENST00000338192 862 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 TPRX2P-201ENST00000535362 881 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.32■□□□□ 0.68
SSC5DA1L4H1 RPSAP52-203ENST00000622976 1023 ntBASIC19.32■□□□□ 0.68
SSC5DA1L4H1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 KRT8P39-201ENST00000396270 1433 ntBASIC19.31■□□□□ 0.68
SSC5DA1L4H1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SSC5DA1L4H1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SSC5DA1L4H1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms