Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 AC104692.2-201ENST00000603054 253 ntBASIC15.28■□□□□ 0.04
TMEM129A0AVI4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM129A0AVI4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 INTS4P1-201ENST00000438455 1935 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 ALOX12P2-203ENST00000570921 1945 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 AC079781.3-201ENST00000449110 356 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 AC011467.2-201ENST00000598425 242 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 AL031008.1-201ENST00000619963 541 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 REXO1L6P-202ENST00000619970 1078 ntBASIC15.27■□□□□ 0.04
TMEM129A0AVI4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
TMEM129A0AVI4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 ME2P1-201ENST00000426028 1970 ntBASIC15.27■□□□□ 0.03
TMEM129A0AVI4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.03
TMEM129A0AVI4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TMEM129A0AVI4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 AL513477.1-201ENST00000602865 2407 ntBASIC15.26■□□□□ 0.03
TMEM129A0AVI4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM129A0AVI4 AC007967.3-201ENST00000434308 558 ntBASIC15.26■□□□□ 0.03
TMEM129A0AVI4 AC132008.2-207ENST00000454517 770 ntBASIC15.26■□□□□ 0.03
TMEM129A0AVI4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms