Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 RHOQP3-201ENST00000437982 621 ntBASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PDPK2P-202ENST00000562415 1191 ntBASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 SNHG9-202ENST00000564014 471 ntBASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 AL513190.1-201ENST00000621254 727 ntBASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA6Q9Y5G7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 KRT18P28-201ENST00000453838 1332 ntBASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 ELL2P1-201ENST00000413990 1906 ntBASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 AL596442.2-201ENST00000610240 980 ntBASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 LINC01451-201ENST00000623792 534 ntBASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA6Q9Y5G7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGA6Q9Y5G7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms