Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TSPY22P-201ENST00000427496 604 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SPDYE13P-201ENST00000445314 798 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 DUX4L17-201ENST00000557360 1267 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 AC090616.6-201ENST00000582640 721 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 AC005363.2-201ENST00000618631 242 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 AC073592.5-201ENST00000624854 528 ntBASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D4Q9Y2X8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D4Q9Y2X8 AC005052.1-201ENST00000625181 2492 ntBASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AL645929.1-201ENST00000420084 975 ntBASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 ACTG1P4-201ENST00000425123 1122 ntBASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AC246785.2-201ENST00000432512 513 ntBASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D4Q9Y2X8 IGHV3-41-201ENST00000613121 348 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms