Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 AC009336.1-201ENST00000608941 1553 ntBASIC16.57■□□□□ 0.24
SATB2Q9UPW6 BX276092.7-203ENST00000637198 1536 ntBASIC16.57■□□□□ 0.24
SATB2Q9UPW6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 SPCS2P1-201ENST00000561636 679 ntBASIC16.57■□□□□ 0.24
SATB2Q9UPW6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 AC004835.2-201ENST00000603762 682 ntBASIC16.57■□□□□ 0.24
SATB2Q9UPW6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SATB2Q9UPW6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AC093512.1-201ENST00000617969 520 ntBASIC16.56■□□□□ 0.24
SATB2Q9UPW6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.56■□□□□ 0.24
SATB2Q9UPW6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SATB2Q9UPW6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 AC009949.1-201ENST00000623048 1830 ntBASIC16.55■□□□□ 0.24
SATB2Q9UPW6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 AL035633.1-201ENST00000406139 838 ntBASIC16.55■□□□□ 0.24
SATB2Q9UPW6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 AC133963.1-201ENST00000504166 1679 ntBASIC16.55■□□□□ 0.24
SATB2Q9UPW6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SATB2Q9UPW6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms