Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNL1Q9UK58 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 FAM86MP-201ENST00000340703 885 ntBASIC21.19■□□□□ 0.98
CCNL1Q9UK58 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 KRT223P-202ENST00000449164 1292 ntBASIC21.19■□□□□ 0.98
CCNL1Q9UK58 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 AC099568.2-201ENST00000609194 695 ntBASIC21.19■□□□□ 0.98
CCNL1Q9UK58 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNL1Q9UK58 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 SERBP1P3-201ENST00000459980 809 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AC123567.1-201ENST00000548294 1261 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 SNX29P1-201ENST00000548357 1007 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AC023310.3-201ENST00000557027 670 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AC100756.1-201ENST00000562736 682 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AP005482.1-201ENST00000563722 1273 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AC138749.3-201ENST00000567691 622 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 AC116165.1-201ENST00000611806 668 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 MIR6775-201ENST00000617557 69 ntBASIC21.18■□□□□ 0.98
CCNL1Q9UK58 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCNL1Q9UK58 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC108860.2-201ENST00000562760 2183 ntBASIC21.17■□□□□ 0.98
CCNL1Q9UK58 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 ORC6-206ENST00000568364 888 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC133552.6-201ENST00000613406 534 ntBASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC004461.2-201ENST00000629517 803 ntBASIC21.17■□□□□ 0.98
CCNL1Q9UK58 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNL1Q9UK58 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNL1Q9UK58 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms