Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FBXO28Q9NVF7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 SNX33P1-201ENST00000592116 1762 ntBASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 RNA5SP421-201ENST00000516864 134 ntBASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FBXO28Q9NVF7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FBXO28Q9NVF7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 AC006277.1-201ENST00000624348 1610 ntBASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 BASP1P1-201ENST00000430708 665 ntBASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.26■□□□□ 0.67
FBXO28Q9NVF7 TUBB8P12-201ENST00000308911 1335 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 TUBB7P-202ENST00000428444 1305 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 TUBB8P7-204ENST00000567960 1332 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 AC092580.3-201ENST00000430932 139 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 KRT18P34-201ENST00000488218 1270 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 AC097493.3-201ENST00000509725 367 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 IGHV3-42-201ENST00000520410 361 ntBASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FBXO28Q9NVF7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 AP3S2-216ENST00000617003 1561 ntBASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.24■□□□□ 0.67
FBXO28Q9NVF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms