Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 AC099521.2-201ENST00000619354 2036 ntBASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ALK-205ENST00000618119 4646 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TMBIM7P-203ENST00000641617 1718 ntBASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
CDC42SE1Q9NRR8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 NPTN-IT1-201ENST00000628401 2283 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 AC083964.2-201ENST00000623988 2396 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms