Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 NDUFV2P1-201ENST00000596415 907 ntBASIC15.42■□□□□ 0.06
CHD8Q9HCK8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.42■□□□□ 0.06
CHD8Q9HCK8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
CHD8Q9HCK8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC008267.1-201ENST00000474858 1069 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RARRES2P5-201ENST00000564013 466 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 MIR3907-201ENST00000579424 151 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC104982.3-201ENST00000581995 514 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RN7SL555P-201ENST00000584742 339 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC020914.3-201ENST00000594712 304 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC018635.2-201ENST00000608625 364 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC244669.2-201ENST00000612320 853 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 MAGEA5-201ENST00000446757 942 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 AL391069.4-201ENST00000609583 481 ntBASIC15.41■□□□□ 0.06
CHD8Q9HCK8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHD8Q9HCK8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 AC098859.1-201ENST00000502915 1238 ntBASIC15.4■□□□□ 0.06
CHD8Q9HCK8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHD8Q9HCK8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD8Q9HCK8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms