Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 BX276092.7-203ENST00000637198 1536 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LIN28AQ9H9Z2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 REXO1L11P-201ENST00000620964 1927 ntBASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 DDX43P3-201ENST00000441064 443 ntBASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 FDX1P1-201ENST00000449115 551 ntBASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AC148477.8-201ENST00000624298 468 ntBASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
LIN28AQ9H9Z2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AL049757.1-201ENST00000616842 1596 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC024909.3-201ENST00000611513 2257 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 LYSMD4-203ENST00000378904 2122 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC092171.3-201ENST00000610122 2651 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC079776.4-201ENST00000511039 504 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 SART3-203ENST00000546611 1184 ntBASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.3■□□□□ 0.2
LIN28AQ9H9Z2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms