Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VPS11Q9H270 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 TUBB8P12-201ENST00000308911 1335 ntBASIC17.01■□□□□ 0.31
VPS11Q9H270 TUBB7P-202ENST00000428444 1305 ntBASIC17.01■□□□□ 0.31
VPS11Q9H270 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS11Q9H270 TUBB8P7-204ENST00000567960 1332 ntBASIC17.01■□□□□ 0.31
VPS11Q9H270 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS11Q9H270 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS11Q9H270 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS11Q9H270 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS11Q9H270 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VPS11Q9H270 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 AC016734.2-201ENST00000624325 1377 ntBASIC17.01■□□□□ 0.31
VPS11Q9H270 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VPS11Q9H270 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS11Q9H270 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VPS11Q9H270 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 KRT18P1-202ENST00000452408 1331 ntBASIC17■□□□□ 0.31
VPS11Q9H270 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VPS11Q9H270 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 ALOX12P2-203ENST00000570921 1945 ntBASIC17■□□□□ 0.31
VPS11Q9H270 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS11Q9H270 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17■□□□□ 0.31
VPS11Q9H270 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 MINOS1P3-201ENST00000457048 203 ntBASIC17■□□□□ 0.31
VPS11Q9H270 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17■□□□□ 0.31
VPS11Q9H270 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VPS11Q9H270 AC024909.3-201ENST00000611513 2257 ntBASIC17■□□□□ 0.31
VPS11Q9H270 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17■□□□□ 0.31
VPS11Q9H270 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17■□□□□ 0.31
VPS11Q9H270 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VPS11Q9H270 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS11Q9H270 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 AC005332.1-201ENST00000577698 1310 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS11Q9H270 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS11Q9H270 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
VPS11Q9H270 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 ME2P1-201ENST00000426028 1970 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VPS11Q9H270 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS11Q9H270 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VPS11Q9H270 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS11Q9H270 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.99■□□□□ 0.31
VPS11Q9H270 AL031133.1-201ENST00000406807 723 ntBASIC16.99■□□□□ 0.31
VPS11Q9H270 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.99■□□□□ 0.31
VPS11Q9H270 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms