Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM4Q9C037 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM4Q9C037 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM4Q9C037 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM4Q9C037 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 AL049840.3-201ENST00000602669 611 ntBASIC16.96■□□□□ 0.31
TRIM4Q9C037 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM4Q9C037 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM4Q9C037 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM4Q9C037 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 AGGF1P2-201ENST00000426656 2106 ntBASIC16.96■□□□□ 0.3
TRIM4Q9C037 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM4Q9C037 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM4Q9C037 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM4Q9C037 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM4Q9C037 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM4Q9C037 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 FLJ16779-201ENST00000612722 7638 ntBASIC16.95■□□□□ 0.3
TRIM4Q9C037 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 ZNF259P1-201ENST00000407656 1365 ntBASIC16.95■□□□□ 0.3
TRIM4Q9C037 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 AC090616.6-201ENST00000582640 721 ntBASIC16.95■□□□□ 0.3
TRIM4Q9C037 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM4Q9C037 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
TRIM4Q9C037 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.95■□□□□ 0.3
TRIM4Q9C037 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM4Q9C037 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM4Q9C037 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms