Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
FOXP3Q9BZS1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FOXP3Q9BZS1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXP3Q9BZS1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.45■□□□□ 0.38
FOXP3Q9BZS1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FOXP3Q9BZS1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AC132008.2-207ENST00000454517 770 ntBASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AL671883.3-201ENST00000603274 991 ntBASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AC148477.8-201ENST00000624298 468 ntBASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AF228730.7-201ENST00000641842 219 ntBASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 AL139384.1-201ENST00000612143 3047 ntBASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FOXP3Q9BZS1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 RNA5SP419-201ENST00000515908 135 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 AC008608.2-201ENST00000606089 416 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 AC006538.3-201ENST00000612495 578 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 AC006538.1-201ENST00000567905 1585 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 PCDHA1-201ENST00000378133 2726 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 IL9RP2-201ENST00000423948 1312 ntBASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FOXP3Q9BZS1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 AL021920.2-201ENST00000624828 1351 ntBASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXP3Q9BZS1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms