Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009509.4-201ENST00000619202 509 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC130456.6-201ENST00000623745 765 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 API5P1-201ENST00000424316 1510 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 BUD13P1-201ENST00000603676 1489 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009102.2-201ENST00000606772 1639 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 ASNSP1-202ENST00000641079 1352 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AP002353.1-201ENST00000528257 1599 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 HNRNPMP1-201ENST00000560685 1768 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 Y_RNA.460-201ENST00000384255 102 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009237.5-201ENST00000414271 501 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 HNRNPA3P3-201ENST00000416838 1137 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009480.2-201ENST00000422916 432 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AL139158.1-201ENST00000424719 340 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AP003385.1-201ENST00000426387 893 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RBM22P3-201ENST00000430648 954 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL7P33-201ENST00000444159 742 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 GNAQP1-201ENST00000444815 1067 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 Z80107.2-201ENST00000445127 392 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 PTGES3P5-201ENST00000455109 434 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 HMGB1P38-201ENST00000490557 577 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL9P15-201ENST00000491096 532 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC026414.1-201ENST00000504046 698 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 TMIGD1-202ENST00000538566 1124 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AP005482.1-201ENST00000563722 1273 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AL031709.1-201ENST00000569831 435 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CPB2-AS1-203ENST00000606351 565 ntTSL 4 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC007490.1-201ENST00000624321 703 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 Z98882.1-201ENST00000622160 2253 ntBASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms